Load alternative splicing annotation from AnnotationHub

Load alternative splicing annotation from AnnotationHub

Usage

loadAnnotation(annotation, cache = getAnnotationHubOption("CACHE"))

Arguments

annotation

Character: annotation to load

cache

Character: path to AnnotationHub cache (used to load alternative splicing event annotation)

Value

List of data frames containing the alternative splicing annotation per event type

See also

Other functions for PSI quantification: filterPSI(), getSplicingEventTypes(), listSplicingAnnotations(), plotRowStats(), quantifySplicing()

Examples

human <- listSplicingAnnotations(species="Homo sapiens")[[1]]
if (FALSE) {
annot <- loadAnnotation(human)
}