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Get curated, literature-based gene lists

Source: R/globalAccess.R
getGeneList.Rd

Available gene lists:

  • Sebestyen et al., 2016: 1350 genes encoding RNA-binding proteins, 167 of which are splicing factors

Usage

getGeneList(genes = NULL)

Arguments

genes

Vector of characters: intersect lists with given genes (lists with no matching genes will not be returned)

Value

List of genes

See also

Other functions for data grouping: createGroupByAttribute(), getSampleFromSubject(), getSubjectFromSample(), groupPerElem(), plotGroupIndependence(), testGroupIndependence()

Examples

getGeneList()
#> Sebestyen et al. 2016
#>   -> Human RNA-binding protein splicing factors [167 genes]: A1CF, ANKHD1, CELF1, CELF2, ...
#>   -> Human RNA-binding proteins [1350 genes]: A1CF, AATF, ABCF1, ABT1, ...
#> 
#> Source: 
#> Endre Sebestyén et al. (2016). Large-scale analysis of genome and transcriptome alterations in multiple tumors unveils novel cancer-relevant splicing networks. Genome Research, 26(6), 732-744
#> ================================================================================